DisGeNET - a database of gene-disease associations

List of associated variants

Metabolic Syndrome X, C0524620

Source: GWASDB ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs964184	ZPR1	0.716	0.440	11	116778201	3 prime UTR variant	G/C	snv		0.82	12
rs2075290	ZPR1	0.882	0.160	11	116782580	intron variant	C/G;T	snv			7
rs6589566	ZPR1	0.882	0.080	11	116781707	intron variant	G/A;C;T	snv			7
rs12286037	ZPR1	1.000	0.040	11	116781491	intron variant	C/T	snv		0.11	6
rs2160669	ZPR1	1.000	0.040	11	116776891	3 prime UTR variant	C/T	snv		0.92	2
rs603446	ZPR1	1.000	0.040	11	116783719	intron variant	C/T	snv		0.33	1
rs13022873	ZNF512	0.882	0.120	2	27592643	intron variant	A/C;T	snv			6
rs6993770	ZFPM2 ; ZFPM2-AS1	0.925	0.080	8	105569300	intron variant	A/T	snv		0.31	2
rs7819412	XKR6	0.827	0.120	8	11187652	intron variant	G/A;T	snv			1
rs17863787	UGT1A9 ; UGT1A8 ; UGT1A6 ; UGT1A7 ; UGT1A10	0.925	0.040	2	233702448	intron variant	T/G	snv		0.30	3
rs2070959	UGT1A8 ; UGT1A7 ; UGT1A9 ; UGT1A10 ; UGT1A6	0.742	0.320	2	233693545	missense variant	A/G	snv	0.31	0.30	3
rs4148325	UGT1A8 ; UGT1A5 ; UGT1A10 ; UGT1A7 ; UGT1A1 ; UGT1A9 ; UGT1A3 ; UGT1A4 ; UGT1A6	0.851	0.080	2	233764663	intron variant	C/T	snv		0.36	3
rs12988520	UGT1A6 ; UGT1A9 ; UGT1A8 ; UGT1A10 ; UGT1A7	1.000	0.040	2	233698748	intron variant	A/C	snv		0.51	2
rs929596	UGT1A5 ; UGT1A4 ; UGT1A9 ; UGT1A10 ; UGT1A8 ; UGT1A7 ; UGT1A6 ; UGT1A3 ; UGT1A1	0.925	0.040	2	233765830	intron variant	A/G	snv		0.32	3
rs7612463	UBE2E2	0.925	0.080	3	23294959	intron variant	C/A;G	snv			1
rs157582	TOMM40	0.851	0.160	19	44892962	intron variant	C/T	snv	0.24	0.29	3
rs767455	TNFRSF1A	0.742	0.400	12	6341779	synonymous variant	T/C	snv	0.37	0.40	1
rs1800610	TNF	0.807	0.320	6	31576050	intron variant	G/A	snv		8.4E-02	1
rs102275	TMEM258	0.827	0.320	11	61790331	non coding transcript exon variant	T/C	snv		0.47	10
rs2206277	TFAP2B	0.925	0.080	6	50830813	intron variant	C/T	snv		0.19	2
rs7903146	TCF7L2	0.554	0.680	10	112998590	intron variant	C/G;T	snv			8
rs12255372	TCF7L2	0.667	0.480	10	113049143	intron variant	G/A;T	snv			3
rs4923918	SPTBN5	0.882	0.160	15	41868745	intron variant	G/A	snv		4.1E-02	1
rs560887	SPC25 ; G6PC2	0.827	0.120	2	168906638	intron variant	T/C	snv	0.79	0.80	7
rs13266634	SLC30A8 ; LOC105375716	0.724	0.480	8	117172544	missense variant	C/A;T	snv	0.29		3